Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative deoxyribonuclease | SAMEA3753097_03517 | Not Available | Positive | 3559104 - 3559886 | 29024.8 |
| radical sam superfamily protein | SAMEA3753097_03518 | Not Available | Negative | 3560400 - 3561104 | 25650.2 |
| glycine radical enzyme, yjji family | SAMEA3753097_03519 | Not Available | Negative | 3561235 - 3562785 | 58009.2 |
| deoxyribose-phosphate aldolase | SAMEA3753097_03520 | Not Available | Positive | 3563043 - 3563822 | 27734.3 |
| thymidine phosphorylase | SAMEA3753097_03521 | Not Available | Positive | 3563949 - 3565271 | 47182.9 |
| phosphopentomutase | SAMEA3753097_03522 | Not Available | Positive | 3565323 - 3566546 | 44400.5 |
| purine nucleoside phosphorylase | SAMEA3753097_03523 | Not Available | Positive | 3566626 - 3567345 | 25951.4 |
| putative transcriptional regulator | SAMEA3753097_03524 | Not Available | Negative | 3567620 - 3567769 | 5663.13 |
| lipoate-protein ligase a | SAMEA3753097_03525 | Not Available | Negative | 3567801 - 3569489 | 63119.5 |
| phosphoserine phosphatase serb | SAMEA3753097_03526 | Not Available | Positive | 3569595 - 3570563 | 35060.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





