Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator | SAMEA3753097_03353 | Not Available | Negative | 3411344 - 3412219 | 29687.7 |
| n-acetylmannosamine-6-phosphate 2-epimerase | SAMEA3753097_03354 | Not Available | Negative | 3412216 - 3412905 | 24089.1 |
| sialic acid transporter | SAMEA3753097_03355 | Not Available | Negative | 3412953 - 3413867 | 32469.4 |
| Trna-arg | Not Available | Not Available | Positive | 3414130 - 3414206 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3414297 - 3414372 | Not Available |
| q antiterminator encoded by prophage cp-933p | SAMEA3753097_03359 | Not Available | Negative | 3414568 - 3415257 | 26437.8 |
| crossover junction endodeoxyribonuclease | SAMEA3753097_03360 | Not Available | Negative | 3415254 - 3415613 | 13651.7 |
| putative prophage protein | SAMEA3753097_03361 | Not Available | Negative | 3415626 - 3416675 | 39359.3 |
| uncharacterised protein | SAMEA3753097_03363 | Not Available | Positive | 3417624 - 3418715 | 41234.8 |
| uncharacterised protein | SAMEA3753097_03364 | Not Available | Positive | 3418712 - 3419140 | 16635.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





