Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-arabinose 5-phosphate isomerase | SAMEA3753097_03332 | Not Available | Positive | 3390472 - 3391458 | 35198.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | SAMEA3753097_03333 | Not Available | Positive | 3391479 - 3392045 | 20016.3 |
| putative organic solvent tolerance protein | SAMEA3753097_03334 | Not Available | Positive | 3392042 - 3392617 | 21703.8 |
| lipopolysaccharide transport periplasmic protein lpta | SAMEA3753097_03335 | Not Available | Positive | 3392586 - 3393143 | 20128.1 |
| lipopolysaccharide abc transporter | SAMEA3753097_03336 | Not Available | Positive | 3393150 - 3393875 | 26802.3 |
| rna polymerase sigma-54 factor (sigma-n) | SAMEA3753097_03337 | Not Available | Positive | 3393923 - 3395356 | 53996.8 |
| putative sigma(54) modulation protein | SAMEA3753097_03338 | Not Available | Positive | 3395379 - 3395666 | 10750.9 |
| pts system transporter subunit iia-like nitrogen-regulatory protein ptsn | SAMEA3753097_03339 | Not Available | Positive | 3395784 - 3396275 | 17960.6 |
| putative atpase | SAMEA3753097_03340 | Not Available | Positive | 3396321 - 3397175 | 32494.2 |
| phosphocarrier protein | SAMEA3753097_03341 | Not Available | Positive | 3397172 - 3397444 | 9810.71 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





