Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease yhbu | SAMEA3753097_03288 | Not Available | Positive | 3350389 - 3351384 | 37051.2 |
| putative peptidase | SAMEA3753097_03289 | Not Available | Positive | 3351393 - 3352271 | 32541.1 |
| monooxygenase | SAMEA3753097_03290 | Not Available | Positive | 3352352 - 3353359 | 37131.5 |
| membrane protein | SAMEA3753097_03291 | Not Available | Negative | 3353337 - 3354056 | 27310.8 |
| putative cytoplasmic protein | SAMEA3753097_03292 | Not Available | Positive | 3354215 - 3354745 | 20256.7 |
| tryptophan-specific transport protein | SAMEA3753097_03293 | Not Available | Negative | 3354806 - 3356050 | 44381.3 |
| atp-dependent rna helicase (dead-box protein) | SAMEA3753097_03294 | Not Available | Negative | 3356204 - 3358093 | 70516.5 |
| lipoprotein nlpi precursor | SAMEA3753097_03295 | Not Available | Negative | 3358273 - 3359157 | 33622.5 |
| polynucleotide phosphorylase | SAMEA3753097_03296 | Not Available | Negative | 3359266 - 3361401 | 77106.6 |
| trna pseudouridine synthase b | SAMEA3753097_03299 | Not Available | Negative | 3362066 - 3363010 | 35123.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





