Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-c motif domain-containing protein | SAMEA3753097_03217 | Not Available | Negative | 3286664 - 3287122 | 16991.2 |
| patatin | SAMEA3753097_03218 | Not Available | Positive | 3287196 - 3288140 | 34329.6 |
| orphan two-component response regulator | SAMEA3753097_03219 | Not Available | Positive | 3288232 - 3289245 | 37362.5 |
| utp--glucose-1-phosphate uridylyltransferase | SAMEA3753097_03220 | Not Available | Positive | 3289447 - 3290355 | 32944.2 |
| h-ns histone family protein | SAMEA3753097_03221 | Not Available | Negative | 3290499 - 3290912 | 15570.5 |
| thymidine kinase | SAMEA3753097_03222 | Not Available | Positive | 3291517 - 3292134 | 23400.8 |
| transposase, is4 family protein | SAMEA3753097_03223 | Not Available | Negative | 3292505 - 3292825 | 11929.8 |
| transposase, is4 family protein | SAMEA3753097_03224 | Not Available | Negative | 3292957 - 3293187 | 8447.1 |
| transposase | SAMEA3753097_03225 | Not Available | Negative | 3293126 - 3293311 | 7043.69 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | SAMEA3753097_03226 | Not Available | Negative | 3293435 - 3296110 | 96176.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





