Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator narl | SAMEA3753097_03205 | Not Available | Negative | 3273763 - 3274413 | 23928.3 |
| nitrate/nitrite two-component sensor kinase | SAMEA3753097_03206 | Not Available | Negative | 3274406 - 3276202 | 67088.0 |
| uncharacterised protein | SAMEA3753097_03207 | Not Available | Positive | 3276228 - 3276446 | 8585.29 |
| nitrite extrusion protein 1 | SAMEA3753097_03208 | Not Available | Positive | 3276541 - 3277932 | 49696.3 |
| respiratory nitrate reductase 1 subunit alpha | SAMEA3753097_03209 | Not Available | Positive | 3278325 - 3282068 | 140550.0 |
| respiratory nitrate reductase 1 subunit beta | SAMEA3753097_03210 | Not Available | Positive | 3282065 - 3283603 | 58083.6 |
| respiratory nitrate reductase 1 subunit delta | SAMEA3753097_03211 | Not Available | Positive | 3283600 - 3284310 | 26454.3 |
| respiratory nitrate reductase 1 subunit gamma | SAMEA3753097_03212 | Not Available | Positive | 3284310 - 3284987 | 25484.9 |
| Trna-tyr | Not Available | Not Available | Positive | 3285528 - 3285612 | Not Available |
| formyltetrahydrofolate deformylase | SAMEA3753097_03216 | Not Available | Negative | 3285772 - 3286614 | 31921.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





