Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | SAMEA3753097_03090 | Not Available | Positive | 3159538 - 3160650 | 40478.6 |
| rare lipoprotein a | SAMEA3753097_03091 | Not Available | Positive | 3160661 - 3161749 | 37502.0 |
| d-alanyl-d-alanine carboxypeptidase | SAMEA3753097_03092 | Not Available | Positive | 3161889 - 3163100 | 44446.5 |
| protein ybed | SAMEA3753097_03093 | Not Available | Positive | 3163210 - 3163473 | 9827.92 |
| lipoate-protein ligase b | SAMEA3753097_03094 | Not Available | Positive | 3163574 - 3164215 | 23884.0 |
| lysr family transcriptional regulator | SAMEA3753097_03095 | Not Available | Positive | 3164475 - 3165428 | 35963.4 |
| lipoyl synthase lipa | SAMEA3753097_03096 | Not Available | Positive | 3165637 - 3166602 | 36073.8 |
| sec-independent protein translocase protein | SAMEA3753097_03097 | Not Available | Negative | 3166703 - 3166906 | 7024.71 |
| amidase | SAMEA3753097_03098 | Not Available | Negative | 3167035 - 3167823 | 28683.0 |
| protein crcb | SAMEA3753097_03099 | Not Available | Positive | 3167916 - 3168299 | 13796.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





