Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | SAMEA3753097_03080 | Not Available | Positive | 3149376 - 3150311 | 33850.9 |
| putative alpha helical protein | SAMEA3753097_03081 | Not Available | Negative | 3150351 - 3150833 | 18798.2 |
| leucyl-trna synthetase | SAMEA3753097_03082 | Not Available | Positive | 3151068 - 3153650 | 97241.0 |
| rare lipoprotein b | SAMEA3753097_03083 | Not Available | Positive | 3153665 - 3154246 | 21329.7 |
| dna polymerase iii subunit delta | SAMEA3753097_03084 | Not Available | Positive | 3154246 - 3155277 | 38688.0 |
| nicotinic acid mononucleotide adenylyltransferase | SAMEA3753097_03085 | Not Available | Positive | 3155279 - 3155920 | 24529.3 |
| alpha-ribazole-5'-phosphate phosphatase | SAMEA3753097_03086 | Not Available | Positive | 3155944 - 3156555 | 23408.9 |
| putative acr | SAMEA3753097_03087 | Not Available | Positive | 3156815 - 3157132 | 11582.9 |
| putative cytoplasmic protein ybea | SAMEA3753097_03088 | Not Available | Positive | 3157136 - 3157603 | 17342.1 |
| penicillin-binding protein 2 | SAMEA3753097_03089 | Not Available | Positive | 3157634 - 3159535 | 70888.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





