Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative diaminopropionate ammonia-lyase | SAMEA3753097_03029 | Not Available | Negative | 3094763 - 3095932 | 42384.0 |
| putative aspartate/ornithine carbamoyltransferase | SAMEA3753097_03030 | Not Available | Negative | 3095990 - 3097177 | 44073.6 |
| transcriptional regulator | SAMEA3753097_03031 | Not Available | Positive | 3097656 - 3099434 | 66116.0 |
| xanthine dehydrogenase iron-sulfur-binding subunit | SAMEA3753097_03032 | Not Available | Negative | 3099474 - 3099953 | 16938.8 |
| xanthine dehydrogenase fad-binding subunit | SAMEA3753097_03033 | Not Available | Negative | 3099950 - 3100828 | 31558.6 |
| xanthine dehydrogenase subunit xdha | SAMEA3753097_03034 | Not Available | Negative | 3100839 - 3103136 | 82634.9 |
| lipoprotein yger | SAMEA3753097_03035 | Not Available | Positive | 3103551 - 3104306 | 26570.0 |
| Trna-gly | Not Available | Not Available | Positive | 3104385 - 3104458 | Not Available |
| uncharacterised protein | SAMEA3753097_03037 | Not Available | Positive | 3105001 - 3105300 | 11400.8 |
| resolvase domain-containing protein | SAMEA3753097_03038 | Not Available | Negative | 3105760 - 3106299 | 19809.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





