Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | SAMEA3753097_02986 | Not Available | Positive | 3045721 - 3046953 | 44178.4 |
| ligase | SAMEA3753097_02989 | Not Available | Negative | 3047735 - 3048283 | 21166.8 |
| z-ring-associated protein | SAMEA3753097_02991 | Not Available | Negative | 3048583 - 3048912 | 12593.9 |
| yeca family protein | SAMEA3753097_02992 | Not Available | Positive | 3049080 - 3049658 | 21230.8 |
| proline aminopeptidase ii | SAMEA3753097_02993 | Not Available | Positive | 3049684 - 3051009 | 49816.2 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMEA3753097_02994 | Not Available | Positive | 3051006 - 3052184 | 42413.0 |
| putative monooxygenase | SAMEA3753097_02995 | Not Available | Positive | 3052207 - 3053409 | 44248.2 |
| aminomethyltransferase (glycine cleavage system protein) | SAMEA3753097_02996 | Not Available | Positive | 3053857 - 3054951 | 40149.0 |
| glycine cleavage system protein h | SAMEA3753097_02997 | Not Available | Positive | 3054975 - 3055364 | 13811.8 |
| glycine dehydrogenase | SAMEA3753097_02998 | Not Available | Positive | 3055483 - 3058356 | 104368.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





