Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ygdd | SAMEA3753097_02193 | Not Available | Positive | 2249081 - 2249476 | 14334.0 |
| putative rna 2'-o-ribose methyltransferase | SAMEA3753097_02194 | Not Available | Positive | 2249469 - 2250569 | 41907.5 |
| fucr family transcriptional regulator | SAMEA3753097_02195 | Not Available | Negative | 2250613 - 2251344 | 27377.8 |
| putative fuscose transport/metabolism protein | SAMEA3753097_02196 | Not Available | Negative | 2251410 - 2251823 | 15176.7 |
| l-fuculokinase | SAMEA3753097_02197 | Not Available | Negative | 2251825 - 2253243 | 52233.6 |
| l-fucose isomerase | SAMEA3753097_02198 | Not Available | Negative | 2253352 - 2255127 | 64952.4 |
| l-fucose permease | SAMEA3753097_02199 | Not Available | Negative | 2255160 - 2256476 | 47547.6 |
| l-fuculose phosphate aldolase | SAMEA3753097_02200 | Not Available | Positive | 2257023 - 2257670 | 23786.7 |
| lactaldehyde reductase (propanediol oxidoreductase) | SAMEA3753097_02201 | Not Available | Positive | 2257698 - 2258846 | 40515.7 |
| 5'-3' exonuclease | SAMEA3753097_02202 | Not Available | Negative | 2258951 - 2259796 | 31470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





