Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase | SAMEA3753097_01191 | Not Available | Negative | 1243967 - 1244488 | 18747.9 |
| yebc/pmpr family dna-binding regulatory protein | SAMEA3753097_01192 | Not Available | Negative | 1244523 - 1245263 | 26424.0 |
| datp pyrophosphohydrolase | SAMEA3753097_01193 | Not Available | Negative | 1245292 - 1245801 | 19330.9 |
| aspartyl-trna synthetase | SAMEA3753097_01194 | Not Available | Negative | 1245862 - 1247634 | 65873.2 |
| putative isochorismatase | SAMEA3753097_01195 | Not Available | Positive | 1247944 - 1248510 | 20476.4 |
| conserved protein, upf0759 family | SAMEA3753097_01196 | Not Available | Positive | 1248507 - 1249001 | 19240.1 |
| site-specific invertase | SAMEA3753097_01197 | Not Available | Positive | 1249076 - 1250599 | 57172.7 |
| transposase orf1 of is683 | SAMEA3753097_01198 | Not Available | Negative | 1251322 - 1251657 | 12661.3 |
| issfl4 orf3 | SAMEA3753097_01199 | Not Available | Positive | 1251746 - 1252531 | 29396.0 |
| integrase | SAMEA3753097_01200 | Not Available | Negative | 1252648 - 1253913 | 48020.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





