Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate:quinone oxidoreductase | SAMEA3753064_00528 | Not Available | Negative | 559735 - 561381 | 60234.1 |
| abc transporter atpase/permease | SAMEA3753064_00529 | Not Available | Negative | 561599 - 563242 | 61572.4 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3753064_00530 | Not Available | Negative | 563318 - 563968 | 24031.7 |
| regulatory protein of adaptative response | SAMEA3753064_00531 | Not Available | Negative | 563968 - 565032 | 39326.0 |
| thiamine biosynthesis lipoprotein | SAMEA3753064_00532 | Not Available | Negative | 565106 - 566161 | 38516.9 |
| outer membrane porin protein c | SAMEA3753064_00533 | Not Available | Negative | 566273 - 567376 | 40410.4 |
| two-component system sensor kinase | SAMEA3753064_00535 | Not Available | Positive | 568116 - 570788 | 100382.0 |
| transcriptional regulator rcsb | SAMEA3753064_00536 | Not Available | Positive | 570805 - 571455 | 23672.0 |
| two-component system sensor kinase | SAMEA3753064_00537 | Not Available | Negative | 571655 - 574504 | 106513.0 |
| sensory histidine kinase atos | SAMEA3753064_00538 | Not Available | Positive | 574671 - 576497 | 67794.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





