Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin i tonb-dependent receptor | SAMEA3753064_00462 | Not Available | Negative | 492690 - 494681 | 73933.5 |
| lysine transporter | SAMEA3753064_00463 | Not Available | Negative | 494975 - 496444 | 53579.0 |
| lysr family transcriptional regulator | SAMEA3753064_00464 | Not Available | Negative | 496649 - 497530 | 32725.7 |
| inner membrane protein | SAMEA3753064_00465 | Not Available | Positive | 497629 - 498678 | 36884.3 |
| endonuclease iv | SAMEA3753064_00466 | Not Available | Positive | 498752 - 499609 | 31493.3 |
| putative pyrimidine kinase | SAMEA3753064_00467 | Not Available | Positive | 499612 - 500700 | 39586.4 |
| putative nucleoside transporter | SAMEA3753064_00468 | Not Available | Negative | 500756 - 502006 | 43396.3 |
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | SAMEA3753064_00469 | Not Available | Negative | 502106 - 503047 | 33768.1 |
| dna-binding transcriptional activator yeil | SAMEA3753064_00470 | Not Available | Positive | 503177 - 503875 | 26873.7 |
| putative nucleoside transporter | SAMEA3753064_00471 | Not Available | Negative | 504072 - 505322 | 43484.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





