Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SAMEA3753064_00346 | Not Available | Negative | 351718 - 352644 | 34609.0 |
| d-ala-d-ala transporter subunit ddpd | SAMEA3753064_00347 | Not Available | Negative | 352637 - 353623 | 36125.1 |
| abc transporter permease | SAMEA3753064_00348 | Not Available | Negative | 353620 - 354516 | 31942.9 |
| abc transporter permease | SAMEA3753064_00349 | Not Available | Negative | 354513 - 355535 | 37367.3 |
| abc transporter substrate-binding protein | SAMEA3753064_00350 | Not Available | Negative | 355537 - 357087 | 57612.1 |
| d-alanyl-d-alanine dipeptidase | SAMEA3753064_00351 | Not Available | Negative | 357101 - 357682 | 21242.3 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | SAMEA3753064_00352 | Not Available | Negative | 357940 - 360339 | 90287.6 |
| putative signal transduction protein | SAMEA3753064_00353 | Not Available | Negative | 360364 - 361746 | 53196.8 |
| putative lipoprotein | SAMEA3753064_00354 | Not Available | Negative | 362123 - 363442 | 49566.9 |
| glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) | SAMEA3753064_00355 | Not Available | Negative | 363573 - 365108 | 55080.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





