Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin | SAMEA3753064_00335 | Not Available | Negative | 340523 - 340813 | 10782.7 |
| inner membrane protein | SAMEA3753064_00336 | Not Available | Negative | 341072 - 341896 | 29478.7 |
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | SAMEA3753064_00338 | Not Available | Positive | 345245 - 346129 | 32240.4 |
| formate dehydrogenase-n subunit gamma | SAMEA3753064_00339 | Not Available | Positive | 346122 - 346775 | 25370.0 |
| putative plasmid maintenance protein | SAMEA3753064_00340 | Not Available | Negative | 347004 - 347288 | 10401.7 |
| alcohol dehydrogenase | SAMEA3753064_00341 | Not Available | Negative | 347434 - 348444 | 35398.6 |
| malate dehydrogenase | SAMEA3753064_00342 | Not Available | Negative | 348578 - 350275 | 63167.0 |
| 30s ribosomal subunit s22 | SAMEA3753064_00343 | Not Available | Negative | 350432 - 350569 | 5096.13 |
| biofilm-dependent modulation protein | SAMEA3753064_00344 | Not Available | Negative | 350671 - 350886 | 7987.26 |
| peroxiredoxin (osmotically-inducible protein c) | SAMEA3753064_00345 | Not Available | Positive | 351231 - 351662 | 15028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





