Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein | SAMEA3753064_00262 | Not Available | Positive | 259295 - 259885 | 21441.0 |
| putative oxidoreductase | SAMEA3753064_00263 | Not Available | Positive | 260116 - 260976 | 30740.9 |
| phosphatidylglycerophosphate synthase | SAMEA3753064_00264 | Not Available | Positive | 261275 - 261880 | 22614.6 |
| membrane associated ctp-phosphosubstrate transferase | SAMEA3753064_00265 | Not Available | Positive | 261880 - 262776 | 33246.9 |
| putative hydrolase | SAMEA3753064_00266 | Not Available | Positive | 262792 - 264549 | 65388.3 |
| putative enzyme ynbd | SAMEA3753064_00267 | Not Available | Positive | 264539 - 265855 | 50579.6 |
| fmn-dependent nadh-azoreductase | SAMEA3753064_00268 | Not Available | Negative | 265906 - 266511 | 21712.0 |
| atp-dependent helicase hrpa | SAMEA3753064_00269 | Not Available | Positive | 266712 - 270614 | 148952.0 |
| conserved sam-binding protein, duf218 family | SAMEA3753064_00270 | Not Available | Positive | 270886 - 271686 | 29707.4 |
| aldehyde dehydrogenase a | SAMEA3753064_00271 | Not Available | Positive | 271883 - 273322 | 52227.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





