Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | SAMEA3753064_00252 | Not Available | Positive | 249988 - 250734 | 27879.1 |
| phenylacetic acid degradation protein paad | SAMEA3753064_00253 | Not Available | Positive | 250749 - 251246 | 18280.0 |
| subunit of the phenylacetly-coa oxygenase/reductase | SAMEA3753064_00254 | Not Available | Positive | 251254 - 252324 | 39258.2 |
| enoyl-coa hydratase-isomerase | SAMEA3753064_00255 | Not Available | Positive | 252321 - 253088 | 27251.1 |
| enoyl-coa hydratase | SAMEA3753064_00256 | Not Available | Positive | 253088 - 253876 | 28452.4 |
| 3-hydroxyacyl-coa dehydrogenase | SAMEA3753064_00257 | Not Available | Positive | 253923 - 255305 | 50203.6 |
| phenylacetate pathway hotdog-fold thioesterase | SAMEA3753064_00258 | Not Available | Positive | 255295 - 255717 | 14851.6 |
| beta-ketoadipyl coa thiolase | SAMEA3753064_00259 | Not Available | Positive | 255717 - 256922 | 42279.2 |
| phenylacetyl-coa ligase | SAMEA3753064_00260 | Not Available | Positive | 256949 - 258262 | 48969.8 |
| dna-binding transcriptional repressor of phenylacetic acid degradation, aryl-coa responsive | SAMEA3753064_00261 | Not Available | Positive | 258363 - 259313 | 35296.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





