Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cysb | SAMEA3753064_00160 | Not Available | Positive | 153056 - 154030 | 36152.5 |
| small predicted membrane protein | SAMEA3753064_00161 | Not Available | Positive | 154361 - 154489 | 4866.05 |
| protein, c-ter fragment, truncated protein | SAMEA3753064_00162 | Not Available | Positive | 154492 - 154659 | 6338.19 |
| aconitate hydratase 1 | SAMEA3753064_00164 | Not Available | Positive | 155032 - 157707 | 97709.8 |
| gtp cyclohydrolase ii | SAMEA3753064_00165 | Not Available | Negative | 157771 - 158361 | 21837.3 |
| phosphatidylglycerophosphatase b | SAMEA3753064_00166 | Not Available | Positive | 158531 - 159295 | 29022.8 |
| inner membrane protein | SAMEA3753064_00167 | Not Available | Positive | 159444 - 159752 | 11352.1 |
| tetratricopeptide repeat protein | SAMEA3753064_00168 | Not Available | Positive | 159759 - 160928 | 44533.6 |
| orotidine 5'-phosphate decarboxylase | SAMEA3753064_00169 | Not Available | Positive | 161061 - 161858 | 28536.4 |
| translation initiation factor sui1 | SAMEA3753064_00170 | Not Available | Positive | 161858 - 162184 | 11396.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





