Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| domain of uncharacterised function (duf3560) | SAMEA3753064_05725 | Not Available | Positive | 5706372 - 5707733 | 52020.7 |
| adenine-specific dna methylase | SAMEA3753064_05726 | Not Available | Positive | 5707780 - 5708343 | 21065.7 |
| uncharacterised protein | SAMEA3753064_05728 | Not Available | Negative | 5711760 - 5712215 | 16902.1 |
| membrane protein, yeer | SAMEA3753064_05729 | Not Available | Negative | 5712291 - 5713640 | 47645.6 |
| putative antirestriction protein | SAMEA3753064_05730 | Not Available | Positive | 5713836 - 5714075 | 9133.78 |
| ycja | SAMEA3753064_05731 | Not Available | Positive | 5714122 - 5714544 | 15552.5 |
| plasmid protein | SAMEA3753064_05732 | Not Available | Positive | 5714541 - 5714732 | 7279.76 |
| elongation factor tu | SAMEA3753064_05733 | Not Available | Positive | 5716559 - 5716933 | 12410.9 |
| Trna-ala | Not Available | Not Available | Positive | 5717583 - 5717658 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 5717701 - 5717777 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





