Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid sos inhibition protein b | SAMEA3753064_05694 | Not Available | Negative | 5676367 - 5676801 | 15818.7 |
| parb-like nuclease | SAMEA3753064_05695 | Not Available | Negative | 5676856 - 5678814 | 71279.9 |
| conserved putative protein | SAMEA3753064_05696 | Not Available | Negative | 5678878 - 5679111 | 9074.63 |
| single-stranded dna-binding protein | SAMEA3753064_05697 | Not Available | Negative | 5679167 - 5679697 | 19556.0 |
| yubn | SAMEA3753064_05698 | Not Available | Positive | 5679762 - 5680265 | 18197.7 |
| adenine-specific dna methylase | SAMEA3753064_05699 | Not Available | Negative | 5680535 - 5681098 | 21106.8 |
| domain of uncharacterised function (duf3560) | SAMEA3753064_05700 | Not Available | Negative | 5681145 - 5682506 | 51889.3 |
| putative alcohol dehydrogenase (partial) | SAMEA3753064_05701 | Not Available | Positive | 5683258 - 5683362 | 3626.4 |
| hth regulator, tetr family | SAMEA3753064_05702 | Not Available | Negative | 5683420 - 5683794 | 13947.5 |
| transposase | SAMEA3753064_05703 | Not Available | Positive | 5683966 - 5684988 | 39829.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





