Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf1380) | SAMEA3753064_05661 | Not Available | Positive | 5643374 - 5643808 | 16011.0 |
| glycosyl transferase family protein | SAMEA3753064_05662 | Not Available | Positive | 5644236 - 5644406 | 6305.89 |
| transposase | SAMEA3753064_05663 | Not Available | Positive | 5644656 - 5644913 | 9284.03 |
| putative fimbrial protein fanc | SAMEA3753064_05664 | Not Available | Positive | 5645636 - 5646151 | 17527.7 |
| putative fimbrial usher protein fand | SAMEA3753064_05665 | Not Available | Positive | 5646244 - 5648658 | 88661.4 |
| putative fimbrial assembly chaperone fane | SAMEA3753064_05666 | Not Available | Positive | 5648651 - 5649343 | 25812.0 |
| uncharacterised protein | SAMEA3753064_05667 | Not Available | Positive | 5649330 - 5649845 | 18415.2 |
| uncharacterised protein | SAMEA3753064_05668 | Not Available | Positive | 5650143 - 5651045 | 32774.2 |
| arac family transcriptional regulator | SAMEA3753064_05669 | Not Available | Negative | 5652063 - 5652878 | 32531.9 |
| thiol peroxidase | SAMEA3753064_05670 | Not Available | Negative | 5653836 - 5654342 | 18508.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





