Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 transposase | SAMEA3753064_05565 | Not Available | Negative | 5562947 - 5563036 | 3290.01 |
| transposase | SAMEA3753064_05566 | Not Available | Negative | 5563033 - 5563458 | 15987.0 |
| transposase | SAMEA3753064_05567 | Not Available | Positive | 5563512 - 5563760 | 9289.85 |
| bfpm-like protein | SAMEA3753064_05568 | Not Available | Negative | 5563642 - 5564142 | 18747.3 |
| putative spnt protein | SAMEA3753064_05569 | Not Available | Negative | 5564458 - 5565102 | 25423.2 |
| parb-like nuclease | SAMEA3753064_05570 | Not Available | Negative | 5565471 - 5566109 | 24150.8 |
| putative phosphoadenosine phosphosulfate reductase | SAMEA3753064_05571 | Not Available | Negative | 5566094 - 5567326 | 48762.3 |
| putative uvrd/rep helicase-like protein | SAMEA3753064_05572 | Not Available | Negative | 5567827 - 5570508 | 102060.0 |
| potra domain, shlb-type family | SAMEA3753064_05573 | Not Available | Negative | 5570749 - 5571795 | 37226.2 |
| phage protein | SAMEA3753064_05574 | Not Available | Positive | 5572470 - 5572661 | 7385.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





