Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase orf a, is911 | SAMEA3753064_05513 | Not Available | Negative | 5516743 - 5517045 | 11739.1 |
| putative polysaccharide deacetylase | SAMEA3753064_05514 | Not Available | Positive | 5517252 - 5518073 | 32296.6 |
| glycosyl transferase family protein | SAMEA3753064_05515 | Not Available | Positive | 5518076 - 5519164 | 40749.6 |
| virulence protein | SAMEA3753064_05516 | Not Available | Positive | 5519601 - 5520119 | 19863.1 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | SAMEA3753064_05517 | Not Available | Positive | 5520184 - 5521128 | 36446.8 |
| is600 orfab' transposase | SAMEA3753064_05518 | Not Available | Positive | 5521309 - 5522418 | 42588.9 |
| crotonobetaine/carnitine-coa ligase | SAMEA3753064_05520 | Not Available | Positive | 5523828 - 5524721 | 33810.9 |
| carnitinyl-coa dehydratase | SAMEA3753064_05521 | Not Available | Positive | 5524830 - 5525615 | 28207.8 |
| carnitine operon protein caie | SAMEA3753064_05522 | Not Available | Positive | 5525621 - 5526211 | 21157.6 |
| transcriptional activator | SAMEA3753064_05523 | Not Available | Negative | 5526297 - 5526692 | 15393.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





