Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilr protein | SAMEA3753064_05461 | Not Available | Negative | 5470718 - 5471815 | 41418.5 |
| type ii secretion system protein e | SAMEA3753064_05462 | Not Available | Negative | 5471828 - 5473381 | 58246.3 |
| type iv pilus biogenesis protein pilp | SAMEA3753064_05463 | Not Available | Negative | 5473392 - 5473844 | 16066.3 |
| pilo protein | SAMEA3753064_05464 | Not Available | Negative | 5473831 - 5475126 | 48031.6 |
| type ivb pilus formation outer membrane protein, r64 piln family | SAMEA3753064_05465 | Not Available | Negative | 5475119 - 5476801 | 59854.8 |
| pilm protein | SAMEA3753064_05466 | Not Available | Negative | 5476815 - 5477252 | 15718.0 |
| pill protein | SAMEA3753064_05467 | Not Available | Negative | 5477252 - 5478319 | 38597.9 |
| pilk protein | SAMEA3753064_05468 | Not Available | Negative | 5478353 - 5478946 | 23198.9 |
| pilj protein | SAMEA3753064_05469 | Not Available | Negative | 5478943 - 5479239 | 11451.4 |
| pili protein | SAMEA3753064_05470 | Not Available | Negative | 5479502 - 5479660 | 6002.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





