Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753064_05451 | Not Available | Negative | 5461726 - 5461995 | 10437.4 |
| putative yafb protein | SAMEA3753064_05452 | Not Available | Negative | 5462070 - 5462717 | 23544.5 |
| global nucleic acid-binding transcriptional dual regulator | SAMEA3753064_05453 | Not Available | Negative | 5463338 - 5463802 | 17987.5 |
| dna topoisomerase iii | SAMEA3753064_05454 | Not Available | Negative | 5464021 - 5466174 | 79112.6 |
| uncharacterised protein | SAMEA3753064_05455 | Not Available | Negative | 5466179 - 5466754 | 21699.0 |
| uncharacterised protein | SAMEA3753064_05456 | Not Available | Negative | 5466860 - 5467264 | 16044.5 |
| putative endonuclease precursor | SAMEA3753064_05457 | Not Available | Negative | 5467280 - 5467606 | 12494.7 |
| inci1 conjugal transfer prepilin peptidase pilu | SAMEA3753064_05458 | Not Available | Negative | 5468875 - 5469531 | 24533.7 |
| lytic transglycosylase | SAMEA3753064_05459 | Not Available | Negative | 5469516 - 5470076 | 20746.4 |
| type iv prepilin pils | SAMEA3753064_05460 | Not Available | Negative | 5470086 - 5470700 | 21184.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





