Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative gtp-binding protein | SAMEA3753064_05379 | Not Available | Positive | 5401292 - 5402164 | 32452.7 |
| putative antigen 43 precursor (fluffing protein) | SAMEA3753064_05381 | Not Available | Positive | 5402537 - 5405383 | 97334.3 |
| cp4-44 prophage | SAMEA3753064_05382 | Not Available | Positive | 5405504 - 5405704 | 7030.13 |
| gntr family transcriptional regulator | SAMEA3753064_05383 | Not Available | Positive | 5406463 - 5407155 | 26063.5 |
| major facilitator superfamily protein | SAMEA3753064_05384 | Not Available | Positive | 5407178 - 5408605 | 51431.8 |
| ribose operon repressor | SAMEA3753064_05385 | Not Available | Negative | 5408571 - 5409563 | 36587.1 |
| ribokinase | SAMEA3753064_05386 | Not Available | Negative | 5409567 - 5410496 | 32307.4 |
| d-ribose transporter subunit rbsb | SAMEA3753064_05387 | Not Available | Negative | 5410622 - 5411512 | 30940.2 |
| high-affinity ribose transport system permease protein rbsc | SAMEA3753064_05388 | Not Available | Negative | 5411537 - 5412502 | 33454.0 |
| high affinity ribose transport atp-binding protein rbsa | SAMEA3753064_05389 | Not Available | Negative | 5412507 - 5414012 | 54957.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





