Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid stabilisation system protein | SAMEA3753064_05369 | Not Available | Positive | 5388239 - 5388565 | 12420.8 |
| integrase | SAMEA3753064_05370 | Not Available | Positive | 5389029 - 5390291 | 47781.8 |
| hydrolase | SAMEA3753064_05371 | Not Available | Negative | 5390475 - 5391992 | 57375.3 |
| putative pagc-like membrane protein | SAMEA3753064_05372 | Not Available | Negative | 5392768 - 5393325 | 20352.9 |
| transposase | SAMEA3753064_05373 | Not Available | Positive | 5393888 - 5395084 | 43139.6 |
| dna-directed rna polymerase, beta subunit/140 kd subunit | SAMEA3753064_05374 | Not Available | Negative | 5395098 - 5395481 | 14895.4 |
| malate transporter | SAMEA3753064_05375 | Not Available | Negative | 5395647 - 5396216 | 21748.9 |
| putative phage-related regulatory protein | SAMEA3753064_05376 | Not Available | Positive | 5397844 - 5398050 | 7800.53 |
| uncharacterised protein | SAMEA3753064_05377 | Not Available | Positive | 5398144 - 5398746 | 23666.5 |
| phage-associated protein | SAMEA3753064_05378 | Not Available | Positive | 5400186 - 5401208 | 39981.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





