Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer-2 (ai-2) modifying protein lsrg | SAMEA3753064_05304 | Not Available | Negative | 5333897 - 5334187 | 11255.4 |
| putative aldolase | SAMEA3753064_05305 | Not Available | Negative | 5334211 - 5334951 | 26843.7 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SAMEA3753064_05307 | Not Available | Positive | 5337100 - 5338689 | 57332.4 |
| phosphoribosylglycineamide synthetase | SAMEA3753064_05308 | Not Available | Positive | 5338701 - 5339990 | 46016.0 |
| two-component system response regulator | SAMEA3753064_05309 | Not Available | Negative | 5339987 - 5341312 | 48385.4 |
| sensor protein zras | SAMEA3753064_05310 | Not Available | Negative | 5341309 - 5342685 | 50502.0 |
| uncharacterised protein | SAMEA3753064_05311 | Not Available | Positive | 5342792 - 5342920 | 5024.87 |
| zinc resistance protein | SAMEA3753064_05312 | Not Available | Positive | 5342923 - 5343348 | 15200.3 |
| membrane protein | SAMEA3753064_05313 | Not Available | Negative | 5343350 - 5343985 | 24031.1 |
| dna-binding protein hu-alpha | SAMEA3753064_05314 | Not Available | Negative | 5344058 - 5344330 | 9535.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





