Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus assembly protein trah | SAMEA3753064_05232 | Not Available | Negative | 5273686 - 5275059 | 50304.2 |
| conjugal transfer protein trbf | SAMEA3753064_05233 | Not Available | Negative | 5275046 - 5275438 | 15249.8 |
| conjugal transfer protein trbj | SAMEA3753064_05234 | Not Available | Negative | 5275425 - 5275706 | 10176.7 |
| conjugative transfer protein | SAMEA3753064_05235 | Not Available | Negative | 5275696 - 5276241 | 19914.2 |
| conjugative transfer protein | SAMEA3753064_05236 | Not Available | Negative | 5276228 - 5276512 | 10880.4 |
| arta | SAMEA3753064_05237 | Not Available | Positive | 5276593 - 5276907 | 12165.2 |
| conjugal transfer protein trba | SAMEA3753064_05238 | Not Available | Negative | 5276909 - 5277256 | 12916.5 |
| conjugal pilus assembly protein traf | SAMEA3753064_05239 | Not Available | Negative | 5277272 - 5278015 | 28004.7 |
| conjugal transfer protein trbe | SAMEA3753064_05240 | Not Available | Negative | 5278008 - 5278265 | 9806.97 |
| conjugal transfer mating pair stabilization protein tran | SAMEA3753064_05241 | Not Available | Negative | 5278292 - 5280100 | 65861.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





