Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753064_05139 | Not Available | Negative | 5172165 - 5172560 | 14777.0 |
| tyrosine recombinase | SAMEA3753064_05140 | Not Available | Positive | 5172820 - 5173422 | 22994.8 |
| tyrosine recombinase | SAMEA3753064_05141 | Not Available | Positive | 5173899 - 5174495 | 23048.5 |
| type 1 fimbriae major subunit fima | SAMEA3753064_05142 | Not Available | Positive | 5174977 - 5175531 | 18609.9 |
| type-1 fimbrial protein fimi | SAMEA3753064_05143 | Not Available | Positive | 5175689 - 5176135 | 15932.0 |
| type i fimbrial chaperone | SAMEA3753064_05144 | Not Available | Positive | 5176172 - 5176897 | 26660.5 |
| outer membrane usher protein fimd | SAMEA3753064_05145 | Not Available | Positive | 5176964 - 5179600 | 96555.9 |
| fimf protein | SAMEA3753064_05146 | Not Available | Positive | 5179610 - 5180140 | 18700.3 |
| p pilus assembly protein, pilin fima | SAMEA3753064_05147 | Not Available | Positive | 5180153 - 5180656 | 17334.3 |
| fimh protein | SAMEA3753064_05148 | Not Available | Positive | 5180676 - 5181578 | 31488.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





