Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yaca | SAMEA3753064_05119 | Not Available | Positive | 5158744 - 5159013 | 10176.1 |
| yacb | SAMEA3753064_05120 | Not Available | Positive | 5159010 - 5159291 | 10894.2 |
| yacc | SAMEA3753064_05121 | Not Available | Positive | 5159331 - 5159606 | 10594.8 |
| intestinal colonization factor encoded by prophage cp-933o | SAMEA3753064_05122 | Not Available | Positive | 5160008 - 5160766 | 27760.8 |
| uncharacterised protein | SAMEA3753064_05123 | Not Available | Positive | 5161052 - 5161474 | 16600.1 |
| uncharacterised protein | SAMEA3753064_05124 | Not Available | Positive | 5161468 - 5161890 | 16539.0 |
| plasmid stable inheritance protein parb | SAMEA3753064_05125 | Not Available | Negative | 5162381 - 5162731 | 13152.7 |
| plasmid segregation protein | SAMEA3753064_05126 | Not Available | Negative | 5162734 - 5163696 | 35794.5 |
| putative methylase | SAMEA3753064_05127 | Not Available | Positive | 5164212 - 5164895 | 25491.5 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3753064_05128 | Not Available | Positive | 5165005 - 5165373 | 13507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





