Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753064_05108 | Not Available | Positive | 5143753 - 5144328 | 21522.0 |
| trat complement resistance protein | SAMEA3753064_05109 | Not Available | Positive | 5144496 - 5145233 | 26109.4 |
| type iv conjugative transfer system coupling protein trad | SAMEA3753064_05110 | Not Available | Positive | 5145375 - 5147624 | 84480.4 |
| conjugal transfer nickase/helicase trai | SAMEA3753064_05111 | Not Available | Positive | 5147624 - 5152918 | 193441.0 |
| w0003 | SAMEA3753064_05112 | Not Available | Positive | 5152936 - 5153502 | 21538.4 |
| type-f conjugative transfer system pilin acetylase trax | SAMEA3753064_05113 | Not Available | Positive | 5153499 - 5154230 | 26729.7 |
| uncharacterised protein | SAMEA3753064_05114 | Not Available | Positive | 5154420 - 5154704 | 10559.5 |
| uncharacterised protein | SAMEA3753064_05115 | Not Available | Positive | 5154810 - 5155805 | 36841.1 |
| replication regulatory protein repa2 (protein copb) | SAMEA3753064_05116 | Not Available | Positive | 5156249 - 5156509 | 10038.3 |
| replication initiation protein | SAMEA3753064_05118 | Not Available | Positive | 5156804 - 5157826 | 40067.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





