Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbi protein | SAMEA3753064_05098 | Not Available | Positive | 5133183 - 5133647 | 16583.8 |
| traw protein | SAMEA3753064_05099 | Not Available | Positive | 5133647 - 5134282 | 24083.0 |
| conjugal transfer pilus assembly protein trau | SAMEA3753064_05100 | Not Available | Positive | 5134279 - 5135265 | 36453.2 |
| uncharacterised protein | SAMEA3753064_05101 | Not Available | Positive | 5135276 - 5135644 | 14131.1 |
| conjugal transfer pilus assembly protein trbc | SAMEA3753064_05102 | Not Available | Positive | 5135641 - 5136255 | 22340.8 |
| conjugative transfer protein | SAMEA3753064_05103 | Not Available | Positive | 5136252 - 5138090 | 66116.8 |
| traf protein | SAMEA3753064_05104 | Not Available | Positive | 5138087 - 5138866 | 29649.1 |
| conjugative transfer protein | SAMEA3753064_05105 | Not Available | Positive | 5138890 - 5139492 | 21723.2 |
| conjugal transfer pilus assembly protein trah | SAMEA3753064_05106 | Not Available | Positive | 5139498 - 5140859 | 49282.6 |
| conjugal transfer mating pair stabilization protein trag | SAMEA3753064_05107 | Not Available | Positive | 5140861 - 5143743 | 103927.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





