Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yubn | SAMEA3753064_05077 | Not Available | Negative | 5117093 - 5117596 | 18132.7 |
| single-stranded dna-binding protein | SAMEA3753064_05078 | Not Available | Positive | 5117661 - 5118200 | 19707.2 |
| conserved putative protein | SAMEA3753064_05079 | Not Available | Positive | 5118262 - 5118495 | 9071.72 |
| parb-like nuclease | SAMEA3753064_05080 | Not Available | Positive | 5118556 - 5120523 | 72523.1 |
| plasmid sos inhibition protein b | SAMEA3753064_05081 | Not Available | Positive | 5120592 - 5121026 | 15831.7 |
| plasmid sos inhibition protein a | SAMEA3753064_05082 | Not Available | Positive | 5121023 - 5121742 | 27670.9 |
| yubp | SAMEA3753064_05084 | Not Available | Positive | 5122797 - 5123153 | 13611.2 |
| yubp | SAMEA3753064_05085 | Not Available | Positive | 5123172 - 5123306 | 4936.93 |
| putative transglycosylase | SAMEA3753064_05086 | Not Available | Negative | 5123609 - 5124115 | 18875.8 |
| incf transfer protein tram | SAMEA3753064_05087 | Not Available | Positive | 5124585 - 5124971 | 14917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





