Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose mannosyl hydrolase | SAMEA3753064_04506 | Not Available | Positive | 4580917 - 4581426 | 19568.7 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | SAMEA3753064_04507 | Not Available | Positive | 4581408 - 4582856 | 54241.1 |
| phosphomannomutase cpsg | SAMEA3753064_04508 | Not Available | Positive | 4582860 - 4584230 | 50460.5 |
| acetyl transferase | SAMEA3753064_04509 | Not Available | Positive | 4585493 - 4586158 | 23743.8 |
| 6-phosphogluconate dehydrogenase | SAMEA3753064_04510 | Not Available | Positive | 4586359 - 4587765 | 51468.1 |
| udp-glucose 6-dehydrogenase | SAMEA3753064_04511 | Not Available | Positive | 4588015 - 4589181 | 43713.4 |
| o-antigen chain length determinant wzz | SAMEA3753064_04512 | Not Available | Positive | 4589327 - 4590304 | 36265.7 |
| histidine biosynthesis bifunctional protein | SAMEA3753064_04513 | Not Available | Negative | 4590400 - 4591011 | 22856.2 |
| imidazole glycerol phosphate synthase subunit | SAMEA3753064_04514 | Not Available | Negative | 4591005 - 4591781 | 28442.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMEA3753064_04515 | Not Available | Negative | 4591763 - 4592500 | 26040.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





