Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | SAMEA3753064_04423 | Not Available | Positive | 4489702 - 4490526 | 30210.4 |
| conserved protein, duf484 family | SAMEA3753064_04424 | Not Available | Positive | 4490523 - 4491230 | 26758.5 |
| tyrosine recombinase | SAMEA3753064_04425 | Not Available | Positive | 4491227 - 4492123 | 33811.6 |
| haloacid dehalogenase-like hydrolase | SAMEA3753064_04426 | Not Available | Positive | 4492123 - 4492839 | 27123.4 |
| dna helicase ii | SAMEA3753064_04427 | Not Available | Positive | 4492923 - 4495085 | 82008.7 |
| protein | SAMEA3753064_04428 | Not Available | Negative | 4495232 - 4495996 | 28081.4 |
| magnesium and cobalt transport protein cora | SAMEA3753064_04429 | Not Available | Positive | 4496366 - 4497316 | 36591.8 |
| inner membrane protein | SAMEA3753064_04430 | Not Available | Negative | 4497359 - 4497739 | 14550.0 |
| inner membrane protein | SAMEA3753064_04431 | Not Available | Negative | 4497753 - 4498133 | 14427.1 |
| rard protein | SAMEA3753064_04432 | Not Available | Negative | 4498228 - 4499118 | 33285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





