Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator rhar | SAMEA3753064_04328 | Not Available | Positive | 4407256 - 4408194 | 35628.3 |
| l rhamnose-proton symporter | SAMEA3753064_04329 | Not Available | Negative | 4408191 - 4409225 | 37288.1 |
| mn dependent superoxide dismutase | SAMEA3753064_04330 | Not Available | Positive | 4409510 - 4410130 | 23080.2 |
| 2-keto-3-deoxygluconate permease | SAMEA3753064_04331 | Not Available | Positive | 4410390 - 4411373 | 33671.4 |
| mosc domain-containing protein | SAMEA3753064_04332 | Not Available | Positive | 4411522 - 4412196 | 25346.1 |
| two-component sensor kinase | SAMEA3753064_04333 | Not Available | Negative | 4412302 - 4413675 | 51627.3 |
| transcriptional regulatory protein cpxr | SAMEA3753064_04334 | Not Available | Negative | 4413672 - 4414370 | 26313.7 |
| repressor cpxp | SAMEA3753064_04335 | Not Available | Positive | 4414520 - 4415020 | 18966.4 |
| ferrous-iron efflux pump | SAMEA3753064_04336 | Not Available | Positive | 4415169 - 4416071 | 32929.2 |
| uncharacterised protein | SAMEA3753064_04337 | Not Available | Negative | 4416017 - 4416121 | 3760.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





