Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | SAMEA3753064_04307 | Not Available | Positive | 4386079 - 4386516 | 15951.0 |
| putative acetyltransferase | SAMEA3753064_04308 | Not Available | Positive | 4386561 - 4387502 | 35353.4 |
| uncharacterised protein | SAMEA3753064_04309 | Not Available | Positive | 4387917 - 4388024 | 4064.09 |
| copg-family dna-binding protein | SAMEA3753064_04310 | Not Available | Positive | 4388359 - 4388577 | 8408.23 |
| yiif protein | SAMEA3753064_04311 | Not Available | Positive | 4388795 - 4389037 | 9244.94 |
| enterobactin synthetase component d | SAMEA3753064_04312 | Not Available | Positive | 4389037 - 4389219 | 6253.65 |
| putative formate dehydrogenase formation protein | SAMEA3753064_04313 | Not Available | Negative | 4389367 - 4390296 | 34690.5 |
| formate dehydrogenase, cytochrome b556(fdo) subunit | SAMEA3753064_04314 | Not Available | Negative | 4390293 - 4390928 | 24607.7 |
| formate dehydrogenase-o | SAMEA3753064_04315 | Not Available | Negative | 4390925 - 4391827 | 33088.1 |
| formate dehydrogenase accessory protein | SAMEA3753064_04317 | Not Available | Positive | 4395084 - 4395917 | 30503.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





