Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate lyase subunit alpha | SAMEA3753064_04078 | Not Available | Negative | 4154274 - 4155806 | 55194.0 |
| citrate lyase subunit beta | SAMEA3753064_04079 | Not Available | Negative | 4155817 - 4156725 | 33111.6 |
| citrate lyase acyl carrier protein (citrate lyase gamma chain) | SAMEA3753064_04080 | Not Available | Negative | 4156722 - 4157018 | 10689.9 |
| citrate lyase synthetase | SAMEA3753064_04081 | Not Available | Negative | 4157033 - 4158091 | 40079.5 |
| sensor kinase dpib | SAMEA3753064_04082 | Not Available | Positive | 4158471 - 4160129 | 61659.7 |
| two-component response regulator | SAMEA3753064_04083 | Not Available | Positive | 4160098 - 4160778 | 25454.9 |
| c4-dicarboxylate transporter dcuc | SAMEA3753064_04084 | Not Available | Negative | 4160819 - 4162204 | 48415.3 |
| subunit of palmitoyl transferase for lipid a | SAMEA3753064_04085 | Not Available | Positive | 4162793 - 4163353 | 21770.6 |
| protein crcb | SAMEA3753064_04087 | Not Available | Negative | 4163791 - 4164174 | 13796.2 |
| amidase | SAMEA3753064_04088 | Not Available | Positive | 4164267 - 4165055 | 28683.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





