Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative plasmid transfer protein | SAMEA3753064_03946 | Not Available | Positive | 4025913 - 4027271 | 48349.6 |
| htdv | SAMEA3753064_03947 | Not Available | Positive | 4027280 - 4027792 | 19023.8 |
| putative plasmid transfer protein | SAMEA3753064_03948 | Not Available | Positive | 4027793 - 4028650 | 31689.7 |
| putative plasmid transfer protein | SAMEA3753064_03949 | Not Available | Positive | 4028660 - 4029610 | 33795.1 |
| putative transfer protein | SAMEA3753064_03950 | Not Available | Positive | 4029619 - 4032300 | 101936.0 |
| putative plasmid partition protein | SAMEA3753064_03951 | Not Available | Positive | 4035323 - 4036576 | 47027.0 |
| putative plasmid partition protein | SAMEA3753064_03952 | Not Available | Positive | 4036573 - 4037580 | 38619.1 |
| trhz | SAMEA3753064_03953 | Not Available | Negative | 4037764 - 4038156 | 14127.0 |
| uncharacterised protein | SAMEA3753064_03954 | Not Available | Negative | 4038153 - 4038674 | 18957.8 |
| uncharacterised protein | SAMEA3753064_03955 | Not Available | Negative | 4038667 - 4039506 | 30832.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





