Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator yqhc | SAMEA3753064_03813 | Not Available | Negative | 3907762 - 3908718 | 36030.0 |
| putative alcohol dehydrogenase | SAMEA3753064_03814 | Not Available | Positive | 3908855 - 3910018 | 42099.5 |
| 2,5-diketo-d-gluconic acid reductase a | SAMEA3753064_03815 | Not Available | Positive | 3910123 - 3910950 | 31111.4 |
| protein of uncharacterised function (duf3828) | SAMEA3753064_03816 | Not Available | Positive | 3911150 - 3912076 | 34970.0 |
| putative lipoprotein | SAMEA3753064_03817 | Not Available | Positive | 3912127 - 3912384 | 9513.58 |
| radical sam superfamily protein | SAMEA3753064_03818 | Not Available | Negative | 3912427 - 3914646 | 83482.5 |
| sufi protein | SAMEA3753064_03819 | Not Available | Negative | 3914757 - 3916169 | 51834.1 |
| 1-acylglycerol-3-phosphate o-acyltransferase | SAMEA3753064_03820 | Not Available | Negative | 3916244 - 3916981 | 27424.7 |
| topoisomerase iv subunit a | SAMEA3753064_03821 | Not Available | Negative | 3917215 - 3919473 | 83836.3 |
| binding protein | SAMEA3753064_03822 | Not Available | Negative | 3919611 - 3921218 | 60727.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





