Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase isoenzymes formation protein | SAMEA3753064_03712 | Not Available | Positive | 3806349 - 3806621 | 9732.58 |
| hydrogenase isoenzymes formation protein | SAMEA3753064_03713 | Not Available | Positive | 3806621 - 3807742 | 41392.8 |
| hydrogenase isoenzymes formation protein | SAMEA3753064_03714 | Not Available | Positive | 3807739 - 3808749 | 35124.6 |
| formate hydrogenlyase transcriptional activator | SAMEA3753064_03715 | Not Available | Positive | 3808823 - 3810901 | 78443.5 |
| protein | SAMEA3753064_03716 | Not Available | Negative | 3810938 - 3811291 | 13964.2 |
| uncharacterised protein | SAMEA3753064_03717 | Not Available | Positive | 3811348 - 3811581 | 8636.29 |
| dna mismatch repair protein muts | SAMEA3753064_03718 | Not Available | Positive | 3811578 - 3814139 | 95324.6 |
| serine/threonine-specific protein phosphatase 2 | SAMEA3753064_03719 | Not Available | Positive | 3814245 - 3814901 | 25146.7 |
| deor family transcriptional regulator | SAMEA3753064_03720 | Not Available | Negative | 3814952 - 3815719 | 27407.2 |
| oxidoreductase ygbj | SAMEA3753064_03721 | Not Available | Positive | 3815915 - 3816823 | 30693.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





