Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitric oxide reductase flrd-nad(+) reductase | SAMEA3753064_03692 | Not Available | Positive | 3786755 - 3787888 | 41378.1 |
| hydrogenase maturation protein hypf | SAMEA3753064_03693 | Not Available | Negative | 3788016 - 3790268 | 81877.4 |
| electron transport protein hydn | SAMEA3753064_03694 | Not Available | Negative | 3790421 - 3790948 | 19027.2 |
| transcriptional regulator | SAMEA3753064_03695 | Not Available | Negative | 3791097 - 3792110 | 36916.4 |
| arbutin-, cellobiose-, and salicin-specific pts system eiibc component | SAMEA3753064_03696 | Not Available | Positive | 3792367 - 3793824 | 51192.3 |
| 6-phospho-beta-glucosidase | SAMEA3753064_03697 | Not Available | Positive | 3793833 - 3795257 | 53802.6 |
| hth-type transcriptional regulator ygjm | SAMEA3753064_03698 | Not Available | Negative | 3795371 - 3795790 | 15417.2 |
| translation-dependent mrna interferase, toxin of the higb-higa toxin-antitoxin system | SAMEA3753064_03699 | Not Available | Negative | 3795787 - 3796098 | 12426.8 |
| periplasmic or exported protein | SAMEA3753064_03700 | Not Available | Negative | 3796272 - 3797033 | 28453.2 |
| hydrogenase 3 maturation protease | SAMEA3753064_03701 | Not Available | Negative | 3797058 - 3797528 | 17057.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





