Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein csid | SAMEA3753064_03640 | Not Available | Positive | 3741822 - 3742799 | 37377.6 |
| hydroxyglutarate oxidase | SAMEA3753064_03641 | Not Available | Positive | 3742819 - 3744087 | 46056.8 |
| succinate-semialdehyde dehydrogenase | SAMEA3753064_03642 | Not Available | Positive | 3744110 - 3745558 | 51808.1 |
| 4-aminobutyrate aminotransferase | SAMEA3753064_03643 | Not Available | Positive | 3745572 - 3746852 | 45733.3 |
| gamma-aminobutyrate transporter | SAMEA3753064_03644 | Not Available | Positive | 3747090 - 3748490 | 51083.1 |
| gntr family transcriptional regulator | SAMEA3753064_03645 | Not Available | Positive | 3748511 - 3749173 | 24992.3 |
| putative peptidoglycan-binding protein | SAMEA3753064_03646 | Not Available | Negative | 3749174 - 3749623 | 16064.0 |
| membrane protein | SAMEA3753064_03647 | Not Available | Negative | 3749707 - 3749865 | 5865.57 |
| arsr family transcriptional regulator | SAMEA3753064_03648 | Not Available | Positive | 3750048 - 3750347 | 10596.9 |
| inner membrane protein with hydrolase activity | SAMEA3753064_03649 | Not Available | Positive | 3750357 - 3750881 | 18701.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





