Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative amino acid transport protein abc superfamily | SAMEA3753064_03443 | Not Available | Positive | 3554284 - 3554952 | 24802.7 |
| putative cystine abc-transporter, atp-binding protein | SAMEA3753064_03444 | Not Available | Positive | 3554949 - 3555701 | 27677.7 |
| dna-binding transcriptional activator sdia | SAMEA3753064_03445 | Not Available | Positive | 3555931 - 3556653 | 28017.7 |
| conserved protein, duf2594 family | SAMEA3753064_03446 | Not Available | Negative | 3556721 - 3556945 | 8239.04 |
| response regulator uvry | SAMEA3753064_03447 | Not Available | Positive | 3557404 - 3558060 | 23894.1 |
| uvrabc system protein c | SAMEA3753064_03448 | Not Available | Positive | 3558057 - 3559889 | 68192.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMEA3753064_03449 | Not Available | Positive | 3559946 - 3560494 | 20701.7 |
| Trna-gly | Not Available | Not Available | Positive | 3560646 - 3560721 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3560776 - 3560849 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3560862 - 3560948 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





