Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein | SAMEA3753064_03433 | Not Available | Positive | 3544329 - 3544742 | 15002.1 |
| alpha-amylase | SAMEA3753064_03434 | Not Available | Negative | 3544776 - 3546263 | 56617.2 |
| flagellar protein flit | SAMEA3753064_03435 | Not Available | Negative | 3546341 - 3546706 | 13843.7 |
| flagellar protein flis | SAMEA3753064_03436 | Not Available | Negative | 3546706 - 3547116 | 15020.1 |
| flagellar capping protein | SAMEA3753064_03437 | Not Available | Negative | 3547141 - 3548547 | 48500.1 |
| flagellin | SAMEA3753064_03438 | Not Available | Positive | 3548813 - 3550654 | 62525.4 |
| rna polymerase sigma factor for flagellar operon | SAMEA3753064_03439 | Not Available | Positive | 3550974 - 3551693 | 27552.8 |
| fliz protein | SAMEA3753064_03440 | Not Available | Positive | 3551739 - 3552290 | 21572.0 |
| cystine transporter subunit | SAMEA3753064_03441 | Not Available | Positive | 3552321 - 3553178 | 31040.2 |
| d-cysteine desulfhydrase | SAMEA3753064_03442 | Not Available | Positive | 3553283 - 3554269 | 35224.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





