Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridylate kinase | SAMEA3753064_03372 | Not Available | Positive | 3489359 - 3490084 | 25971.9 |
| ribosome recycling factor | SAMEA3753064_03373 | Not Available | Positive | 3490234 - 3490791 | 20639.7 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMEA3753064_03374 | Not Available | Positive | 3490883 - 3492079 | 43337.5 |
| undecaprenyl pyrophosphate synthetase | SAMEA3753064_03375 | Not Available | Positive | 3492268 - 3493026 | 28314.5 |
| uncharacterised protein | SAMEA3753064_03376 | Not Available | Positive | 3493026 - 3493178 | 4984.03 |
| cdp-diglyceride synthase | SAMEA3753064_03377 | Not Available | Positive | 3493147 - 3493896 | 27572.3 |
| zinc metallopeptidase rsep | SAMEA3753064_03378 | Not Available | Positive | 3493908 - 3495260 | 49074.2 |
| outer membrane protein assembly factor | SAMEA3753064_03379 | Not Available | Positive | 3495290 - 3497722 | 90557.5 |
| chaperone protein | SAMEA3753064_03380 | Not Available | Positive | 3497844 - 3498329 | 17689.2 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMEA3753064_03381 | Not Available | Positive | 3498333 - 3499358 | 36040.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





