Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase is605 | SAMEA3753064_04573 | Not Available | Negative | 4643890 - 4645038 | 43688.7 |
| Hypothetical protein | SAMEA3753064_04574 | Not Available | Positive | 4645198 - 4648173 | 108507.0 |
| Putative repressor protein hxr | SAMEA3753064_04575 | Not Available | Positive | 4648163 - 4648468 | 10904.5 |
| outer membrane porin | SAMEA3753064_04576 | Not Available | Positive | 4649208 - 4650320 | 40681.7 |
| Single-stranded dna-binding protein | SAMEA3753064_04577 | Not Available | Negative | 4650554 - 4651042 | 18101.1 |
| uncharacterised protein | SAMEA3753064_04578 | Not Available | Positive | 4651080 - 4651169 | 3272.9 |
| Lysozyme | SAMEA3753064_04579 | Not Available | Positive | 4651212 - 4651769 | 20257.5 |
| Putative head processing protein pro | SAMEA3753064_04580 | Not Available | Negative | 4652061 - 4653080 | 36923.1 |
| Putative portal protein prt | SAMEA3753064_04581 | Not Available | Negative | 4653073 - 4654782 | 62766.6 |
| Putative dna adenine methyltransferase and helicase, darb | SAMEA3753064_04582 | Not Available | Positive | 4654858 - 4661625 | 251503.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





