Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1422611 bp
Thymine Count
1426380 bp
Guanine Count
1445971 bp
Cytosine Count
1435503 bp
Genome Length
5731082 bp
Protein-coding Genes
5131 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidyl-trna synthetase | SAMEA3753064_03116 | Not Available | Positive | 3214569 - 3215843 | 47032.2 |
| conserved protein, upf0070 family | SAMEA3753064_03117 | Not Available | Positive | 3215861 - 3216481 | 22177.2 |
| putative dehydrogenase | SAMEA3753064_03118 | Not Available | Positive | 3216492 - 3217670 | 41829.5 |
| gtp-binding protein enga | SAMEA3753064_03119 | Not Available | Positive | 3217788 - 3219260 | 55039.1 |
| protein | SAMEA3753064_03120 | Not Available | Positive | 3219329 - 3219544 | 7901.64 |
| exodeoxyribonuclease 7 large subunit | SAMEA3753064_03121 | Not Available | Negative | 3219541 - 3220911 | 51863.4 |
| inosine 5'-monophosphate dehydrogenase | SAMEA3753064_03122 | Not Available | Positive | 3221073 - 3222539 | 52025.6 |
| bifunctional gmp synthase/glutamine amidotransferase protein | SAMEA3753064_03123 | Not Available | Positive | 3222608 - 3224185 | 58668.5 |
| uncharacterised protein | SAMEA3753064_03124 | Not Available | Negative | 3224280 - 3224819 | 20231.4 |
| putative lipoprotein | SAMEA3753064_03125 | Not Available | Negative | 3224835 - 3225350 | 17574.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





